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SRX11450672: Agave fourcroydes root biological replicate 2
1 ILLUMINA (Illumina HiSeq 4000) run: 23.3M spots, 2.3G bases, 861.8Mb downloads

Design: The libraries were prepared using the KAPA Stranded mRNA-Seq kit (07962193001) for Illumina platforms following the manufacturer's protocol. Transcripts insert sizes of 150-180 bp were used. Libraries were separated into two pools and each pool was sequenced in a single lane, generating 50bp paired-end reads.
Submitted by: University of Campinas
Study: Transcriptional profiling of three abandoned Agave cultivars
PRJNA746623 • SRP328392 • All experiments • All runs
show Abstracthide Abstract
Transcriptome of A. sisalana, A. fourcroydes, and Agave hybrid 11648 ((A. amaniensis x A. angustifolia) x A. amaniensis) (H11648) growing under field conditions without irrigation for 7 years in non-calcic brown soil and semi-arid climate. For all cultivars, leaf (central fraction of the proximal-distal axis), root, and stem were sampled at noon. Leaf maturity equivalency was maintained by sampling only the fifth leaf counted from the central spike of each plant.
Sample: FTRL-8
SAMN20229223 • SRS9491098 • All experiments • All runs
Organism: Agave fourcroydes
Library:
Name: FTRL_8
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: Oligo-dT
Layout: PAIRED
Runs: 1 run, 23.3M spots, 2.3G bases, 861.8Mb
Run# of Spots# of BasesSizePublished
SRR1514322023,347,1722.3G861.8Mb2021-12-07

ID:
15315771

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